Predictive coding evidence

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Appendix D endnote 1, from How Emotions are Made: The Secret Life of the Brain by Lisa Feldman Barrett.
Some context is:

At present, we have scientific evidence that all the external sensory systems (vision, hearing, etc.) operate by prediction.

Here are some good references containing evidence for predictive coding in sensory systems:

You can also read more about prediction in general.[16][17][18][19][20][21][22][23][24][25]


Notes on the Notes

  1. Rao, Rajesh PN, and Dana H. Ballard. 1999. "Predictive coding in the visual cortex: a functional interpretation of some extra-classical receptive-field effects." Nature Neuroscience 2 (1): 79-87.
  2. Gilbert, Charles D., and Wu Li. 2013. "Top-down influences on visual processing." Nature Reviews Neuroscience 14 (5): 350-363.
  3. Kok, Peter, Lauren J. Bains, Tim van Mourik, David G. Norris, and Floris P. de Lange. 2016. "Selective activation of the deep layers of the human primary visual cortex by top-down feedback." Current Biology 26 (3): 371-376.
  4. Henderson, John M. 2016. "Gaze control as prediction." Trends in Cognitive Sciences, http://dx.doi.org/10.1016/j.tics.2016.11.003
  5. Chennu, Srivas, Valdas Noreika, David Gueorguiev, Alejandro Blenkmann, Silvia Kochen, Agustín Ibáñez, Adrian M. Owen, and Tristan A. Bekinschtein. 2013. "Expectation and attention in hierarchical auditory prediction." Journal of Neuroscience 33 (27): 11194-11205.
  6. Wacongne, Catherine, Etienne Labyt, Virginie van Wassenhove, Tristan Bekinschtein, Lionel Naccache, and Stanislas Dehaene. 2011. "Evidence for a hierarchy of predictions and prediction errors in human cortex." Proceedings of the National Academy of Sciences 108 (51): 20754-20759.
  7. Wacongne, Catherine, Jean-Pierre Changeux, and Stanislas Dehaene. 2012. "A Neuronal Model of Predictive Coding Accounting for the Mismatch Negativity." The Journal of Neuroscience, 32 (11): 3665-3678.
  8. Gardner, Matthew PH, and Alfredo Fontanini. 2014. "Encoding and tracking of outcome-specific expectancy in the gustatory cortex of alert rats." Journal of Neuroscience 34 (39): 13000-13017.
  9. Kusumoto-Yoshida, Ikue, Haixin Liu, Billy T. Chen, Alfredo Fontanini, and Antonello Bonci. 2015. "Central role for the insular cortex in mediating conditioned responses to anticipatory cues." Proceedings of the National Academy of Sciences 112 (4): 1190-1195.
  10. Mandairon, Nathalie, and Christiane Linster. 2009. "Odor perception and olfactory bulb plasticity in adult mammals." Journal of Neurophysiology 101 (5): 2204-2209.
  11. Zelano, Christina, Aprajita Mohanty, and Jay A. Gottfried. 2011. "Olfactory predictive codes and stimulus templates in piriform cortex." Neuron 72 (1): 178-187.
  12. Howard, James D., Jay A. Gottfried, Philippe N. Tobler, and Thorsten Kahnt. 2015. "Identity-specific coding of future rewards in the human orbitofrontal cortex." Proceedings of the National Academy of Sciences 112 (16): 5195-5200.
  13. Naeije, Gilles, Thibaut Vaulet, Vincent Wens, Brice Marty, Serge Goldman, and Xavier De Tiège. 2016. "Multilevel Cortical Processing of Somatosensory Novelty: A Magnetoencephalography Study." Frontiers in Human Neuroscience, 10: 259. doi:10.3389/fnhum.2016.00259
  14. Ostwald, Dirk, Bernhard Spitzer, Matthias Guggenmos, Timo T. Schmidt, Stefan J. Kiebel, and Felix Blankenburg. 2012. "Evidence for neural encoding of Bayesian surprise in human somatosensation." NeuroImage 62 (1): 177-188.
  15. Shergill, Sukhwinder S., Thomas P. White, Daniel W. Joyce, Paul M. Bays, Daniel M. Wolpert, and Chris D. Frith. 2013. "Modulation of somatosensory processing by action." Neuroimage 70: 356-362.
  16. Chanes, Lorena, and Lisa Feldman Barrett. 2016. “Redefining the Role of Limbic Areas in Cortical Processing.” Trends in Cognitive Sciences 20 (2): 96–106.
  17. Friston, Karl. 2010. "The free-energy principle: a unified brain theory?." Nature Reviews Neuroscience 11 (2): 127-138.
  18. Clark, Andy. 2013. "Whatever next? Predictive brains, situated agents, and the future of cognitive science." Behavioral and Brain Sciences 36 (3): 181-204.
  19. Mumford, David. 1992. "On the computational architecture of the neocortex." Biological Cybernetics 66 (3): 241-251.
  20. Barrett, Lisa Feldman, and W. Kyle Simmons. 2015. “Interoceptive Predictions in the Brain.” Nature Reviews Neuroscience 16 (7): 419–429.
  21. Barrett, Lisa Feldman. 2017. "The theory of constructed emotion: an active inference account of interoception and categorization." Social Cognitive and Affective Neuroscience 12 (1): 1-23.
  22. Denève, Sophie, and Renaud Jardri. 2016. "Circular inference: mistaken belief, misplaced trust." Current Opinion in Behavioral Sciences 11: 40-48.
  23. Jiang, Jiefeng, Jeffrey Beck, Katherine Heller, and Tobias Egner. "An insula-frontostriatal network mediates flexible cognitive control by adaptively predicting changing control demands." Nature Communications 6, doi 10.1038/ncomms9165.
  24. Crapse, Trinity B., and Marc A. Sommer. 2008. "Corollary discharge across the animal kingdom." Nature Reviews Neuroscience 9 (8): 587-600.
  25. Kok, Peter and Floris P. de Lange. 2015. "Predictive coding in sensory cortex." In An Introduction to Model-Based Cognitive Neuroscience, edited by Birte U. Forstmann and Eric-Jan Wagenmakers. New York: Springer.